Neftalí Ochoa-Alejo | RNA-Seq Data Analysis | Outstanding Scientist Award

Prof. Dr. Neftalí Ochoa-Alejo | RNA-Seq Data Analysis | Outstanding Scientist Award

Professor Investigador at Cinvestav-Unidad Irapuato, Mexico

Dr. Neftalí Ochoa Alejo is a distinguished plant biotechnologist whose research over the past four decades has significantly advanced the field of plant physiology, tissue culture, and molecular biology. As a Senior Researcher at Cinvestav-Irapuato in Mexico, he has become internationally recognized for his pioneering work on the genetic and biochemical mechanisms underpinning capsaicinoid biosynthesis in chili peppers (Capsicum spp.), among other species. His prolific academic output includes over 70 peer-reviewed journal articles, numerous book chapters, and several edited volumes. Through leadership, editorial roles, and mentorship, Dr. Ochoa Alejo has shaped generations of researchers and contributed deeply to scientific and agricultural communities both nationally and internationally.

Profile

ORCID

Education

Dr. Ochoa Alejo earned his Ph.D. in Biochemistry from the Institute of Chemistry at the University of São Paulo, Brazil, in 1983. He holds a Master’s degree in Soil and Plant Nutrition from the same university’s Escola Superior de Agricultura “Luiz de Queiroz” (1981), and a Bachelor’s degree in Chemical Bacteriology and Parasitology from the National School of Biological Sciences, IPN, Mexico City (1977). This strong foundation in chemistry and plant science has underpinned his interdisciplinary approach to plant biotechnology and molecular biology.

Experience

His career spans both research and academic leadership, with roles including full-time researcher, department head, and academic coordinator. Dr. Ochoa Alejo has worked with prestigious institutions such as UNAM and the Autonomous University of Baja California Sur. Since 1984, he has served at Cinvestav-Irapuato, rising from Adjunct Professor to full Cinvestav Researcher Level 3D. In addition, he has held key administrative positions, including Department Head of Biotechnology and Biochemistry (2010–2018) and Academic Coordinator (1992–1997). His extensive contributions to institutional growth and research infrastructure have had a lasting impact on Mexican plant science.

Research Interest

Dr. Ochoa Alejo’s research is primarily focused on the biochemical and genetic regulation of specialized metabolism in plants, particularly the biosynthesis of capsaicinoids, anthocyanins, and carotenoids in Capsicum spp. He is an expert in plant tissue culture, in vitro regeneration, gene silencing (VIGS), and transcriptomic analysis. His studies also extend into abiotic stress physiology and metabolic engineering. His recent work explores the regulatory roles of MYB transcription factors and the application of CRISPR-Cas in gene function studies, highlighting his continued innovation in molecular plant biology.

Awards

Dr. Ochoa Alejo is a Level III member of Mexico’s National System of Researchers (SNI), reflecting his top-tier contributions to science. He has served on multiple national scientific evaluation committees and editorial boards, including In Vitro Cellular and Developmental Biology – Plant and Revista Fitotecnia Mexicana. He is a member of the Mexican Academy of Sciences, the Mexican Society of Biochemistry, and international societies such as The American Society of Plant Biologists. His leadership in national science councils like CONCYTEG and the Latin American Botanical Network further demonstrates his wide-reaching influence and commitment to science policy and research excellence.

Publications

Among his numerous scientific contributions, seven of his most cited works include:

Arce-Rodríguez ML, Ochoa-Alejo N. (2017). An R2R3-MYB transcription factor regulates capsaicinoid biosynthesis. Plant Physiology, 174:1359–1370. [Cited by ~400+ articles]

Gómez-García MR, Ochoa-Alejo N. (2013). Biochemistry and molecular biology of carotenoid biosynthesis in chili peppers. Int. J. Mol. Sci. 14:19025–19053. [Cited by ~500+]

Aza-González C, Núñez-Palenius HG, Ochoa-Alejo N. (2011). Molecular biology of capsaicinoid biosynthesis in chili pepper. Plant Cell Reports, 30:695–706. [Cited by ~300+]

Kothari SL, Joshi A, Kachhawa S, Ochoa-Alejo N. (2010). Chili peppers: a review on tissue culture and transgenesis. Biotechnol. Adv. 28:35–48. [Cited by ~350+]

Martínez-López LA, Ochoa-Alejo N, Martínez O. (2014). Dynamics of the chili pepper transcriptome during fruit development. BMC Genomics, 15:143. [Cited by ~200+]

Arce-Rodríguez ML, Martínez O, Ochoa-Alejo N. (2021). Genome-wide identification of MYB transcription factors in chili pepper. Int. J. Mol. Sci. 22:2229. [Cited by ~150+]

Villa-Rivera MG, Ochoa-Alejo N. (2020). Chili pepper carotenoids: Nutraceutical properties and mechanisms of action. Molecules 25:5573. [Cited by ~100+]

Conclusion

Given his unparalleled scientific achievements, leadership in national and international academic circles, decades of dedication to mentorship, and profound influence on plant biotechnology, Dr. Neftalí Ochoa Alejo is not only suitable but is an ideal candidate for the Research for Outstanding Scientist Award. His career reflects excellence, integrity, and impact—qualities that define this prestigious recognition.

Nazanin Zounemat-Kermani | Computational Systems Medicine | Best Researcher Award

Dr Nazanin Zounemat-Kermani | Computational Systems Medicine | Best Researcher Award

Dr. Nazanin Zounemat-Kermani is an accomplished biomedical data scientist whose research stands at the forefront of precision medicine, respiratory disease, and artificial intelligence. Currently serving as a Postdoctoral Research Associate at both the National Heart and Lung Institute (NHLI) and the Data Science Institute (DSI) at Imperial College London, she has earned international recognition for her leadership in multi-omics data integration and machine learning applications in health sciences.

Profile:

🎓 Educational Background:

Dr. Kermani’s academic journey reflects a rare interdisciplinary blend of computer science and biomedical research. She holds a PhD in Biomedicine from Imperial College London (2020), following dual master’s degrees in Artificial Intelligence from the University of Amsterdam (2011) and Machine Learning and Robotics from the University of Tehran (2004). Her academic roots trace back to a Bachelor of Engineering in Software Engineering from Ferdowsi University of Mashhad (2002).

💼 Professional Experience:

Since 2020, Dr. Kermani has worked as a Postdoctoral Research Associate at Imperial College London, after several years as a Research Assistant and PhD candidate in Zoltan Takats’ Lab. Her academic trajectory within one of the world’s top institutions reflects both her scientific rigor and leadership capabilities.

🎓🤝 Academic Mentorship:

Dr. Nazanin Zounemat-Kermani is widely respected not only for her scientific contributions but also for her unwavering commitment to mentorship and academic leadership. Throughout her career, she has actively nurtured the growth of early-career scientists, postdoctoral researchers, and graduate students. As a senior member of interdisciplinary consortia such as AI-RESPIRE, PRISM, and U-BIOPRED, she has led cross-functional teams spanning clinical science, data engineering, and machine learning—mentoring junior colleagues in both technical development and scientific publishing. Her leadership style is inclusive and empowering, emphasizing hands-on guidance in areas such as statistical modeling, research communication, and responsible data science.

🏆 Awards and Honors:

Dr. Kermani has received numerous accolades, including the MSACL Young Investigator Award (2016), Scholar Awards from the American Thoracic Society (2022, 2023), and multiple research grants from prestigious bodies such as the UKRI, MRC, and EPSRC. She has also been invited to present her research by eminent scholars at institutions like Oxford University and Amsterdam UMC.

🌍 Global Projects and Leadership

Dr. Kermani has led and contributed to numerous high-impact international projects, including:

  • RASP-UK: She developed a robust data management platform supporting clinical and omics data integration for asthma research.

  • PIONEER: Co-led machine learning initiatives in prostate cancer, resulting in a key senior-author publication.

  • U-BIOPRED: Coordinated Europe’s largest severe asthma cohort study, publishing over 20 peer-reviewed articles and acting as corresponding author on influential multi-omics studies.

  • UK-Korea PRISM: Leads cross-national efforts in asthma pathophysiology using advanced analytics and single-cell data.

  • AI-RESPIRE: Heads AI model development for environmental and physiological time-series data, mentoring early-career researchers.

  • DeVENT and PROmics: Oversees analysis in critical care and deep learning integration in patient-reported outcomes.

📚 Publications:

  1. CC16 Confers Protection Against Influenza A Virus Infection in Human Airway Epithelium
    H. Kimura, N.Z. Kermani, N. Kimura, M.M. Siddiq, D. Francisco, I.M. Adcock, et al.
    American Journal of Respiratory and Critical Care Medicine, Vol. 211 (Abstracts), 2025.

  2. Distinct Single-Cell Transcriptional Profile in CD4⁺ T-Lymphocytes Among Obese Children With Asthma
    V. Tejwani, R. Wang, A. Villabona-Rueda, K. Suresh, T.D. Wu, I.M. Adcock, et al.
    American Journal of Physiology – Lung Cellular and Molecular Physiology, Vol. 328(3), 2025.

  3. Female Sex Hormones and the Oral Contraceptive Pill Modulate Asthma Severity Through GLUT-1
    A.C. Brown, O.R. Carroll, J.R. Mayall, N. Zounemat-Kermani, S.L.E. Vinzenz, et al.
    Mucosal Immunology, 2025.

  4. Neutrophilic Inflammation in Sputum or Blood Does Not Define a Clinically Distinct Asthma Phenotype in ATLANTIS
    P.J.M. Kuks, T.M. Kole, M. Kraft, S. Siddiqui, L.M. Fabbri, K.F. Rabe, A. Papi, et al.
    ERJ Open Research, Vol. 11(1), 2025.

  5. The Role of WNT5a and TGF‐β1 in Airway Remodelling and Severe Asthma
    T. Daud, S. Roberts, N. Zounemat-Kermani, M. Richardson, L.G. Heaney, et al.
    Allergy, 2025.

  6. Clinical Importance of Patient-Reported Outcome Measures in Severe Asthma: Results from U-BIOPRED
    R. Meys, F.M.E. Franssen, A.J. Van ‘t Hul, P.S. Bakke, M. Caruso, B. Dahlén, et al.
    Health and Quality of Life Outcomes, Vol. 22(1), Article 109, 2024.

  7. Radiomultiomics: Quantitative CT Clusters of Severe Asthma Associated With Multiomics
    N.Z. Kermani, K.F. Chung, G. Macis, G. Santini, F.A.A. Clemeno, A. Versi, K. Sun, et al.
    European Respiratory Journal, Vol. 64(5), 2024.

  8. S12 Association Between Disease Duration and FEV1 in Severe Asthma Phenotypes and Endotypes
    F. Yang, N. Zounemat-Kermani, P. Dixey, I.M. Adcock, C.I. Bloom, K.F. Chung
    Thorax, Vol. 79(Suppl 2), A15–A16, 2024.

  9. S120 Post-Hoc Analysis of Transcriptomic and Clinical Predictors of Remission in the ATLANTIS Cohort
    A.A. Kumar, T.M. Kole, M.C. Nawijn, K.F. Rabe, A. Papi, C. Brightling, D. Singh, et al.
    Thorax, Vol. 79(Suppl 2), A83–A84, 2024.

  10. Discovery and Validation of a Volatile Signature of Eosinophilic Airway Inflammation in Asthma
    R. Peltrini, R.L. Cordell, M. Wilde, S. Abuhelal, E. Quek, N. Zounemat-Kermani, et al.
    American Journal of Respiratory and Critical Care Medicine, Vol. 210(9), pp. 1101–1112, 2024.

  11. Cardiovascular Events in CML Patients Treated With Nilotinib: Validation of the HFA-ICOS Baseline Risk Score
    M. Andres, F. Fernando, S. Claudiani, N. Kermani, G. Ceccarelli, J. Apperley, et al.
    European Heart Journal, Vol. 45(Suppl 1), ehae666.3169, 2024.

  12. Scientific Business Abstracts
    F. Cooles, G. Vidal-Pedrola, N. Naamane, A. Pratt, B. Barron-Millar, et al.
    QJM: An International Journal of Medicine, Article hcae157, 2024.

  13. A Severe Asthma Phenotype of Excessive Airway Haemophilus influenzae Relative Abundance Associated With Sputum Neutrophilia
    A. Versi, A. Azim, F.X. Ivan, M.I. Abdel-Aziz, S. Bates, J. Riley, M. Uddin, et al.
    Clinical and Translational Medicine, Vol. 14(9), e70007, 2024.

  14. Host-Microbial Interactions Differ With Age of Asthma Onset
    A. Versi, A. Azim, F.X. Ivan, M.I. Abdel-Aziz, S. Bates, J. Riley, et al.
    European Respiratory Journal, 2024.

  15. Cardiovascular Events in CML Patients Treated With Nilotinib: Validation of the HFA-ICOS Baseline Risk Score
    F. Fernando, M.S. Andres, S. Claudiani, N.Z. Kermani, G. Ceccarelli, A.J. Innes, et al.
    Cardio-Oncology, Vol. 10(1), Article 42, 2024.

  16. Endotypes of Severe Neutrophilic and Eosinophilic Asthma From Multi-Omics Integration of U-BIOPRED Sputum Samples
    N.Z. Kermani, C.X. Li, A. Versi, Y. Badi, K. Sun, M.I. Abdel-Aziz, M. Bonatti, et al.
    Clinical and Translational Medicine, Vol. 14(7), e1771, 2024.

  17. IL-33 Induced Gene Expression in Activated Th2 Effector Cells Is Dependent on IL-1RL1 Haplotype and Asthma Status
    A.K.S. Jayalatha, M.E. Ketelaar, L. Hesse, Y.E. Badi, N. Zounemat-Kermani, et al.
    European Respiratory Journal, Vol. 63(6), 2024.

  18. Comparison of Asthma Phenotypes in Severe Asthma Cohorts (SARP, U-BIOPRED, ProAR and COREA) From Four Continents
    S.Y. Park, S. Fowler, D.E. Shaw, I.M. Adcock, A.R. Sousa, R. Djukanovic, et al.
    Allergy, Asthma & Immunology Research, Vol. 16(4), p. 338, 2024.

  19. Enose-Derived Response Clusters in Severe Asthmatics Treated With Anti-IL5/5R Biologics
    P. Dixey, N. Zounemat-Kermani, K. Raby, P.K. Bhavsar, K.F. Chung
    B16. Novel Insights Into Asthma Pathogenesis, A3013, 2024.

  20. Association of CC16 Expression in the Airways With Signature Expression of Multi-Omics Data
    H. Kimura, N.Z. Kermani, I.M. Adcock, K.F. Chung, M. Kraft
    D91. Bridging the Gap: Translational Studies in ARDS, Pneumonia, and Sepsis, 2024.

Nuno Domingues | Algorithm Development for Bioinformatics | Excellence in Research Award

Prof. Dr. Nuno Domingues | Algorithm Development for Bioinformatics | Excellence in Research Award  

Prof . Dr at ISEL, Portugal.

Dr. Nuno A. S. Domingues is a distinguished researcher and educator in the fields of Electrical Engineering, Energy Systems, and Science Communication, currently serving as a Professor at the Instituto Superior de Engenharia de Lisboa (ISEL) in Portugal. With a rare blend of technical depth and interdisciplinary expertise, Dr. Domingues has pursued multiple postdoctoral fellowships and has been at the forefront of innovation in areas such as smart grids, sustainable technologies, machine learning, and engineering education. His career reflects a strong commitment to advancing clean and intelligent technologies, bridging science and society, and inspiring the next generation of engineers and researchers.

Profile:

🎓 Academic Background

Dr. Nuno A. S. Domingues is a highly accomplished academic with a deeply interdisciplinary foundation in engineering and science communication. He holds three postdoctoral degrees—in Mechanical Engineering (2022) and Electrical Engineering & Computer Science (2020) from IST, and in Science Communication (2021) from FCSH-UNL. He earned his Ph.D. in Electrical Engineering and Computer Science from FCT-UNL in 2015, following his Master’s degree from IST in 2008 and an Undergraduate (5-year) program in Electrical Engineering from ISEL in 2005. His academic journey reflects a rare blend of technical depth and communicative versatility.

🔬 Research Interests

Dr. Domingues’ research explores the cutting-edge intersection of technology, sustainability, and human decision-making. His core areas include modeling and simulation, energy systems, SCADA, decision support systems (DSS), intelligent optimization, and machine learning. He also delves into clean technologies, mobility and transport, sustainable consumption, regulatory frameworks, e-learning, and science communication. This wide-ranging expertise equips him to tackle real-world problems from both technical and societal perspectives.

📜 Certifications & Honors

Beyond academia, Dr. Domingues is a certified science and engineering trainer by the Conselho Científico-Pedagógico da Formação Contínua of Minho University. He holds the European Computer Driving License (ECDL) certification, demonstrating his commitment to digital literacy and technology proficiency. Additionally, his Leadership Certification from the Military Academy showcases his ability to lead and inspire in high-pressure, strategic environments.

Publication 

Title: Science education through project-based learning: A case study
Publication: Procedia Computer Science
Year: 2023

Title: Industry 4.0 in maintenance: Using condition monitoring in electric machines
Publication: 2021 International Conference on Decision Aid Sciences and Application (DASA)
Year: 2021

Title: Lithium prospection in Portugal for e-mobility and solar PV expansion
Publication: Commodities, 1(2), 98–114
Year: 2022

Title: Decision making in the electricity sector using performance indicators
Publication: Energy, Ecology and Environment, 2(1), 60–84
Year: 2017

Title: Prospection techniques for Oil and shale gas
Publication: International Journal of Petrochemistry and Research, Lisbon, Portugal, 3(1)
Year: 2019

Title: Oferta Estratégica da Geração em Mercados de Energia
Publication: ISEL, 1st Workshop in ISEL (18–19 October 2005)
Year: 2005

Title: ARDS mortality prediction model using evolving clinical data and chest radiograph analysis
Publication: Biomedicines, 12(2), 439
Year: 2024